Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn1aA2APX8 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.43■□□□□ 0.54
Scn1aA2APX8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.42■□□□□ 0.54
Scn1aA2APX8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Gm7791-201ENSMUST00000219066 539 ntBASIC18.42■□□□□ 0.54
Scn1aA2APX8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Gm17661-201ENSMUST00000170317 270 ntBASIC18.42■□□□□ 0.54
Scn1aA2APX8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn1aA2APX8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Gm18959-201ENSMUST00000208954 655 ntBASIC18.41■□□□□ 0.54
Scn1aA2APX8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn1aA2APX8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Gm18958-201ENSMUST00000174258 762 ntBASIC18.4■□□□□ 0.54
Scn1aA2APX8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Rarb-207ENSMUST00000225921 2756 ntBASIC18.4■□□□□ 0.54
Scn1aA2APX8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.4■□□□□ 0.54
Scn1aA2APX8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.4■□□□□ 0.54
Scn1aA2APX8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn1aA2APX8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn1aA2APX8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn1aA2APX8 Gm7370-201ENSMUST00000219471 767 ntBASIC18.39■□□□□ 0.53
Scn1aA2APX8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn1aA2APX8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Scn1aA2APX8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn1aA2APX8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Gm18032-201ENSMUST00000222541 538 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms