Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 AC159114.1-201ENSMUST00000220349 266 ntBASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Gm15853-202ENSMUST00000195518 2041 ntBASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Shroom2A2ALU4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Shroom2A2ALU4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Shroom2A2ALU4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC27.8■■■□□ 2.04
Shroom2A2ALU4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shroom2A2ALU4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Cmtm5-203ENSMUST00000227441 610 ntBASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Shroom2A2ALU4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 AC160338.1-201ENSMUST00000214232 705 ntBASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC27.77■■■□□ 2.04
Shroom2A2ALU4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Shroom2A2ALU4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Gm14140-201ENSMUST00000119999 995 ntBASIC27.76■■■□□ 2.03
Shroom2A2ALU4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shroom2A2ALU4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC27.74■■■□□ 2.03
Shroom2A2ALU4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
Shroom2A2ALU4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Shroom2A2ALU4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Shroom2A2ALU4 Gm9727-201ENSMUST00000161387 555 ntBASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms