Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Atg4a-psA0A0G2JFS9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Atg4a-psA0A0G2JFS9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Mir1199-201ENSMUST00000117015 119 ntBASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Atg4a-psA0A0G2JFS9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Atg4a-psA0A0G2JFS9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.28■■□□□ 1
Atg4a-psA0A0G2JFS9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm24841-201ENSMUST00000158676 357 ntBASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.27■■□□□ 1
Atg4a-psA0A0G2JFS9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atg4a-psA0A0G2JFS9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atg4a-psA0A0G2JFS9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms