Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm13234-201ENSMUST00000120010 747 ntBASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trav13-4-dv7A0A075B6C2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13-4-dv7A0A075B6C2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms