Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-5A0A075B6B5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-5A0A075B6B5 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.61□□□□□ -0.23
Trav6-5A0A075B6B5 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.61□□□□□ -0.23
Trav6-5A0A075B6B5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-5A0A075B6B5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Gm43137-201ENSMUST00000198052 594 ntBASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-5A0A075B6B5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-5A0A075B6B5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-5A0A075B6B5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-5A0A075B6B5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-5A0A075B6B5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6-5A0A075B6B5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Gm15546-201ENSMUST00000122095 826 ntBASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav6-5A0A075B6B5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-5A0A075B6B5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-5A0A075B6B5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms