Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Gm17971-201ENSMUST00000190239 806 ntBASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav8n-2A0A075B633 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Gm17808-201ENSMUST00000200859 894 ntBASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav8n-2A0A075B633 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav8n-2A0A075B633 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav8n-2A0A075B633 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav8n-2A0A075B633 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms