Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav1A0A075B5Z4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav1A0A075B5Z4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Gm6576-201ENSMUST00000169678 883 ntBASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav1A0A075B5Z4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav1A0A075B5Z4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav1A0A075B5Z4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav1A0A075B5Z4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav1A0A075B5Z4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav1A0A075B5Z4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Gm13158-201ENSMUST00000122007 736 ntBASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms