Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm27036-201ENSMUST00000182465 980 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm27805-201ENSMUST00000184513 79 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm37167-201ENSMUST00000194946 396 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm42720-201ENSMUST00000196813 300 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm45789-201ENSMUST00000213038 364 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Mir134-201ENSMUST00000083492 71 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm15560-201ENSMUST00000117107 643 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm14854-201ENSMUST00000117758 841 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm14107-201ENSMUST00000117774 330 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm14388-201ENSMUST00000118119 477 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm14861-201ENSMUST00000119451 455 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm12852-201ENSMUST00000119478 719 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm10444-201ENSMUST00000126708 148 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm26371-201ENSMUST00000157829 104 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm22859-201ENSMUST00000174978 122 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm25037-201ENSMUST00000175418 110 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21241-201ENSMUST00000179551 934 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm10925-201ENSMUST00000189941 678 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm20819-201ENSMUST00000191091 925 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm20871-201ENSMUST00000191322 931 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm44023-201ENSMUST00000203710 469 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
H2afb2S4R1M3 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.28□□□□□ -1.73
H2afb2S4R1M3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
H2afb2S4R1M3 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.27□□□□□ -1.73
H2afb2S4R1M3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms