Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm8458-201ENSMUST00000196658 819 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm8069-201ENSMUST00000197887 154 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm20586-201ENSMUST00000210122 547 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm45701-201ENSMUST00000212049 235 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm46138-201ENSMUST00000215294 426 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 AC154730.1-201ENSMUST00000227874 816 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm22272-201ENSMUST00000104039 134 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm13333-201ENSMUST00000119424 781 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm26347-201ENSMUST00000157526 131 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm16589-201ENSMUST00000159522 918 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm3030-201ENSMUST00000163410 516 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm3339-201ENSMUST00000163462 475 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm29138-201ENSMUST00000191444 348 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm37961-201ENSMUST00000192729 299 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm37934-201ENSMUST00000192902 402 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm23407-201ENSMUST00000082538 91 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim3Q9R1R2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Mir193b-201ENSMUST00000103784 79 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm12520-201ENSMUST00000117493 316 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm12328-201ENSMUST00000118611 197 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm15206-201ENSMUST00000119143 454 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm13932-201ENSMUST00000120873 610 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm5391-201ENSMUST00000121155 613 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm13745-201ENSMUST00000121994 527 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm24251-201ENSMUST00000157324 114 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm24774-201ENSMUST00000157384 134 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm24751-201ENSMUST00000157844 102 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.25□□□□□ -1.73
Trim3Q9R1R2 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm27690-201ENSMUST00000184596 126 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm28625-201ENSMUST00000188309 205 ntBASIC4.25□□□□□ -1.73
Trim3Q9R1R2 Gm23925-202ENSMUST00000188429 132 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms