Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm15297-201ENSMUST00000117795 290 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm8604-201ENSMUST00000183150 965 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm28017-201ENSMUST00000183434 126 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm38356-201ENSMUST00000194313 408 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm21006-201ENSMUST00000196930 667 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm6863-201ENSMUST00000052882 636 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Six6Q9QZ28 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.35□□□□□ -1.87
Six6Q9QZ28 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm23424-201ENSMUST00000103889 110 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm11923-201ENSMUST00000118135 508 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm13213-201ENSMUST00000119668 474 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm23789-201ENSMUST00000122536 301 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm4617-201ENSMUST00000178993 331 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm18698-201ENSMUST00000192327 668 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm34768-201ENSMUST00000193884 565 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm17887-201ENSMUST00000200194 547 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm19065-202ENSMUST00000203910 1165 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Gm4587-201ENSMUST00000209135 637 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Clec2j-201ENSMUST00000032517 515 ntBASIC3.34□□□□□ -1.87
Six6Q9QZ28 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Six6Q9QZ28 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Six6Q9QZ28 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Six6Q9QZ28 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.34□□□□□ -1.88
Six6Q9QZ28 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Six6Q9QZ28 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Six6Q9QZ28 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Six6Q9QZ28 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Six6Q9QZ28 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Six6Q9QZ28 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm23697-201ENSMUST00000103897 110 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm22273-201ENSMUST00000104040 132 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm13550-201ENSMUST00000118185 525 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm12788-201ENSMUST00000119090 308 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm15364-201ENSMUST00000119618 585 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm25179-201ENSMUST00000122632 128 ntBASIC3.33□□□□□ -1.88
Six6Q9QZ28 Gm16345-201ENSMUST00000146065 158 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms