Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm37219-201ENSMUST00000192036 926 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm7182-201ENSMUST00000193351 732 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm38670-201ENSMUST00000199248 77 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm43136-201ENSMUST00000200403 636 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm18442-201ENSMUST00000220925 639 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm8202-201ENSMUST00000117682 310 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm11890-201ENSMUST00000119585 417 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm13132-201ENSMUST00000121194 472 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm23496-201ENSMUST00000157741 248 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm22261-201ENSMUST00000158691 324 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm15508-201ENSMUST00000160330 325 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm17142-201ENSMUST00000164933 645 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm28267-201ENSMUST00000191093 265 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm18900-201ENSMUST00000193218 584 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm9245-201ENSMUST00000200528 983 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm34149-201ENSMUST00000203547 304 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm19726-201ENSMUST00000205008 240 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm45078-201ENSMUST00000205343 546 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm21041-201ENSMUST00000214829 823 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC134917.2-201ENSMUST00000223354 124 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm24144-201ENSMUST00000082632 111 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.04□□□□□ -1.76
Trem1Q9JKE2 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm24935-201ENSMUST00000103770 110 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm14995-201ENSMUST00000117135 391 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm13314-201ENSMUST00000118742 335 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.03□□□□□ -1.76
Trem1Q9JKE2 Gm13932-201ENSMUST00000120873 610 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms