Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm28267-201ENSMUST00000191093 265 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm42451-201ENSMUST00000197410 244 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm39197-201ENSMUST00000212069 457 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm37655-201ENSMUST00000193968 4123 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm24318-201ENSMUST00000104490 131 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm14299-201ENSMUST00000117586 397 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm14861-201ENSMUST00000119451 455 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm2862-201ENSMUST00000161524 328 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm37300-201ENSMUST00000193327 280 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm43028-201ENSMUST00000202561 481 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm8820-201ENSMUST00000204077 571 ntBASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cpsf1Q9EPU4 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm24792-201ENSMUST00000104286 128 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm11931-201ENSMUST00000121630 447 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm11692-201ENSMUST00000122121 902 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm12755-201ENSMUST00000122297 282 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm25817-201ENSMUST00000177758 121 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm24766-201ENSMUST00000179182 121 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm5974-201ENSMUST00000181607 986 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.73□□□□□ -1.49
Cpsf1Q9EPU4 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm26075-201ENSMUST00000104062 121 ntBASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm29774-201ENSMUST00000219270 436 ntBASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Cpsf1Q9EPU4 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC5.71□□□□□ -1.49
Cpsf1Q9EPU4 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cpsf1Q9EPU4 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cpsf1Q9EPU4 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
Cpsf1Q9EPU4 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Cpsf1Q9EPU4 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Mir690-201ENSMUST00000102110 109 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm11281-201ENSMUST00000141391 576 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm23098-201ENSMUST00000157552 299 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm19774-201ENSMUST00000190667 114 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm43596-201ENSMUST00000202818 884 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm44099-201ENSMUST00000203299 112 ntBASIC5.71□□□□□ -1.5
Cpsf1Q9EPU4 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms