Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm22498-201ENSMUST00000104497 86 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm14854-201ENSMUST00000117758 841 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm14500-201ENSMUST00000121647 113 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm22519-201ENSMUST00000158270 178 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm23633-201ENSMUST00000175293 119 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm21850-201ENSMUST00000179792 359 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Mir6933-201ENSMUST00000184982 81 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm37088-201ENSMUST00000193887 406 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm45499-201ENSMUST00000211656 280 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Mir147-201ENSMUST00000102354 79 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm23905-201ENSMUST00000157568 109 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm26355-201ENSMUST00000158220 105 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm24675-201ENSMUST00000158757 259 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm8221-201ENSMUST00000178052 564 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Mir7074-201ENSMUST00000183884 63 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm27805-201ENSMUST00000184513 79 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm43304-201ENSMUST00000196803 326 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm44054-201ENSMUST00000203814 372 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.14□□□□□ -1.75
Cdc40Q9DC48 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cdc40Q9DC48 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Mir761-201ENSMUST00000103245 76 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm22488-201ENSMUST00000116811 127 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm14172-201ENSMUST00000118255 644 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm12401-201ENSMUST00000118435 228 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm12852-201ENSMUST00000119478 719 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm25150-201ENSMUST00000157121 60 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm22536-201ENSMUST00000158171 134 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm27834-201ENSMUST00000183427 125 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm29228-201ENSMUST00000185489 418 ntBASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.13□□□□□ -1.75
Cdc40Q9DC48 Gm28639-201ENSMUST00000191519 481 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms