Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Mir582-201ENSMUST00000103758 81 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm24350-201ENSMUST00000104163 133 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm12691-201ENSMUST00000120186 456 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm24690-201ENSMUST00000157759 97 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm24295-201ENSMUST00000158298 131 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm27541-201ENSMUST00000184078 122 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm27538-201ENSMUST00000185065 294 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28943-201ENSMUST00000186187 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28736-201ENSMUST00000186257 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28604-201ENSMUST00000186629 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29401-201ENSMUST00000186690 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28566-201ENSMUST00000186714 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29178-204ENSMUST00000186784 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28589-201ENSMUST00000186991 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28936-201ENSMUST00000187153 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28194-201ENSMUST00000187412 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29121-201ENSMUST00000187611 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28243-201ENSMUST00000187801 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28886-202ENSMUST00000187889 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28844-202ENSMUST00000187977 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28554-202ENSMUST00000189175 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29058-201ENSMUST00000189510 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29213-202ENSMUST00000189703 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28851-202ENSMUST00000189757 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29624-201ENSMUST00000190018 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28461-201ENSMUST00000190023 484 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28780-201ENSMUST00000190223 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28969-211ENSMUST00000190992 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28990-207ENSMUST00000191219 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm36468-201ENSMUST00000192119 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm31572-201ENSMUST00000193341 615 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm30175-201ENSMUST00000194173 615 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms