Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm24265-201ENSMUST00000101833 141 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm23768-201ENSMUST00000104440 131 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm25563-201ENSMUST00000104603 74 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm11256-201ENSMUST00000118109 829 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm6893-201ENSMUST00000118385 522 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm11774-201ENSMUST00000118601 293 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm14783-201ENSMUST00000118900 663 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm13013-201ENSMUST00000119087 523 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm12935-201ENSMUST00000119352 246 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm16100-201ENSMUST00000120489 231 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm12438-201ENSMUST00000122034 336 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm25846-201ENSMUST00000158013 135 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm25013-201ENSMUST00000158402 128 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm23619-201ENSMUST00000178411 94 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm24897-201ENSMUST00000179033 107 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm25474-201ENSMUST00000179052 94 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm22047-201ENSMUST00000179176 94 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm7413-201ENSMUST00000219498 462 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm24446-201ENSMUST00000083982 156 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm23795-201ENSMUST00000084006 137 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm11826-201ENSMUST00000118781 438 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm16423-201ENSMUST00000120078 947 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm7855-201ENSMUST00000137737 687 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm8041-201ENSMUST00000199755 616 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm43762-201ENSMUST00000201521 295 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm43026-201ENSMUST00000202972 325 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm44856-201ENSMUST00000206639 304 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.59□□□□□ -1.51
Ssu72Q9CY97 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms