Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mup-ps8-201ENSMUST00000178663 545 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Mup-ps9-201ENSMUST00000178847 545 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Mup-ps6-201ENSMUST00000179564 545 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm26925-201ENSMUST00000182470 957 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm37430-201ENSMUST00000193039 196 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm42621-201ENSMUST00000198114 275 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm18467-201ENSMUST00000208805 434 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm31166-201ENSMUST00000209326 288 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm45530-201ENSMUST00000211658 225 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm18592-201ENSMUST00000221529 276 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm23851-201ENSMUST00000083831 103 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm21286-201ENSMUST00000098035 545 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Trim11Q99PQ2 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm25917-201ENSMUST00000104267 130 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm24275-201ENSMUST00000116780 146 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm11270-201ENSMUST00000117685 471 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm9308-201ENSMUST00000119073 448 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm15781-201ENSMUST00000120216 323 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm14563-201ENSMUST00000120571 354 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm13738-201ENSMUST00000122437 469 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm22492-201ENSMUST00000157192 297 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm22867-201ENSMUST00000157499 109 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm24737-201ENSMUST00000158861 100 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm8296-201ENSMUST00000185597 524 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm38040-201ENSMUST00000193505 225 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm42805-201ENSMUST00000196158 276 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm9057-201ENSMUST00000198791 296 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm45690-201ENSMUST00000210775 246 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC147240.1-201ENSMUST00000218767 431 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm2436-201ENSMUST00000219562 774 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim11Q99PQ2 Gm42483-201ENSMUST00000197556 1742 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm13311-201ENSMUST00000117863 379 ntBASIC6.5□□□□□ -1.37
Trim11Q99PQ2 Gm9059-201ENSMUST00000118319 183 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms