Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Snord66-201ENSMUST00000104051 75 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm25726-201ENSMUST00000104529 129 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm15796-201ENSMUST00000162135 204 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm38221-201ENSMUST00000195146 365 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm37095-201ENSMUST00000195421 205 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm43596-201ENSMUST00000202818 884 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm33626-201ENSMUST00000206790 828 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm19181-201ENSMUST00000218891 940 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm14854-201ENSMUST00000117758 841 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm11483-201ENSMUST00000119839 247 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm22819-201ENSMUST00000157445 303 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm16545-201ENSMUST00000161968 463 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm17152-201ENSMUST00000172430 535 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm27457-201ENSMUST00000184771 156 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm5372-201ENSMUST00000187540 409 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm5252-201ENSMUST00000189030 909 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm19030-201ENSMUST00000194947 552 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm8069-201ENSMUST00000197887 154 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm31532-201ENSMUST00000203555 767 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm23875-201ENSMUST00000083711 318 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Nup88Q8CEC0 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm13386-201ENSMUST00000117677 124 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm14107-201ENSMUST00000117774 330 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm12507-201ENSMUST00000119155 415 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm14688-201ENSMUST00000119169 303 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm12577-201ENSMUST00000119701 574 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm14991-201ENSMUST00000119913 598 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm15019-201ENSMUST00000120148 434 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm14725-201ENSMUST00000120324 828 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm23465-201ENSMUST00000157134 262 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm26487-201ENSMUST00000158022 94 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Mir3104-201ENSMUST00000174911 63 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm27036-201ENSMUST00000182465 980 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm29097-201ENSMUST00000190273 422 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm42666-201ENSMUST00000201954 152 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm45171-201ENSMUST00000206360 736 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm6988-201ENSMUST00000222676 375 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Gm6043-201ENSMUST00000099961 492 ntBASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms