Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm28614-201ENSMUST00000186483 458 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm5368-201ENSMUST00000189012 589 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm28190-201ENSMUST00000189766 722 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm28924-201ENSMUST00000190012 241 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm44054-201ENSMUST00000203814 372 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm45006-201ENSMUST00000206078 690 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm44757-201ENSMUST00000206373 157 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm44845-201ENSMUST00000208773 335 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm23407-201ENSMUST00000082538 91 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm23510-201ENSMUST00000083083 163 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.36□□□□□ -1.71
Lrif1Q8CDD9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm12285-201ENSMUST00000117347 233 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm14067-201ENSMUST00000119340 314 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm24898-201ENSMUST00000158133 106 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Mir6963-201ENSMUST00000183535 71 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Mir7031-201ENSMUST00000183860 65 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm37934-201ENSMUST00000192902 402 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm36997-201ENSMUST00000195090 707 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm43894-201ENSMUST00000203274 688 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm44952-201ENSMUST00000204443 433 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Lrif1Q8CDD9 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm24124-201ENSMUST00000104103 132 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm25271-201ENSMUST00000157273 290 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm8221-201ENSMUST00000178052 564 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm28859-201ENSMUST00000186650 616 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm37670-201ENSMUST00000193622 229 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm9238-201ENSMUST00000196181 329 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm18100-201ENSMUST00000200897 452 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Olfr881-201ENSMUST00000074611 948 ntBASIC4.34□□□□□ -1.71
Lrif1Q8CDD9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms