Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp40Q8BWR4 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm11322-201ENSMUST00000118095 435 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm13503-201ENSMUST00000119017 446 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm12044-201ENSMUST00000120335 213 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm9569-201ENSMUST00000187492 787 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm29641-201ENSMUST00000188955 259 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm8891-201ENSMUST00000198546 832 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm45236-201ENSMUST00000208632 229 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm18252-203ENSMUST00000215855 757 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC164117.2-201ENSMUST00000222090 327 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC167669.3-201ENSMUST00000224720 393 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 AC160930.1-201ENSMUST00000227194 337 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm14404-201ENSMUST00000119117 1660 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp40Q8BWR4 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC6.8□□□□□ -1.32
Usp40Q8BWR4 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm12988-201ENSMUST00000119054 478 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm5943-201ENSMUST00000119458 459 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm13745-201ENSMUST00000121994 527 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm16125-201ENSMUST00000159003 339 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm16114-201ENSMUST00000161930 300 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm26828-201ENSMUST00000180640 172 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm38046-201ENSMUST00000192733 550 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm37550-201ENSMUST00000193230 463 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm6366-201ENSMUST00000198766 826 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm45658-201ENSMUST00000209197 580 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm18228-201ENSMUST00000217297 1091 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm8672-201ENSMUST00000221200 332 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 AC192333.1-201ENSMUST00000224573 376 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Olfr881-201ENSMUST00000074611 948 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Usp40Q8BWR4 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Usp40Q8BWR4 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms