Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm27315-201ENSMUST00000183977 154 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28094-201ENSMUST00000185262 390 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm29031-201ENSMUST00000185316 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm29000-201ENSMUST00000185444 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28204-201ENSMUST00000185934 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28290-201ENSMUST00000186505 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28161-201ENSMUST00000186669 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28439-201ENSMUST00000187714 876 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm28749-209ENSMUST00000189599 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm37670-201ENSMUST00000193622 229 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm33163-201ENSMUST00000194504 614 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm5876-201ENSMUST00000203735 243 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm4057-201ENSMUST00000221407 368 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup54Q8BTS4 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm15385-201ENSMUST00000118725 667 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm14688-201ENSMUST00000119169 303 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm24939-201ENSMUST00000158325 137 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Mir6963-201ENSMUST00000183535 71 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm29610-201ENSMUST00000187749 453 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm28830-201ENSMUST00000188192 213 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm20177-201ENSMUST00000203705 334 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm45458-201ENSMUST00000209900 522 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm23407-201ENSMUST00000082538 91 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm23464-201ENSMUST00000083145 147 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup54Q8BTS4 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Synpr-207ENSMUST00000223583 3362 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm14628-201ENSMUST00000117508 635 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm15058-201ENSMUST00000117689 458 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm12571-201ENSMUST00000118132 243 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm14750-201ENSMUST00000118262 516 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm4852-201ENSMUST00000121202 729 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm11385-201ENSMUST00000121513 570 ntBASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup54Q8BTS4 Gm23171-201ENSMUST00000157159 264 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms