Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm24374-201ENSMUST00000104394 106 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Mir669i-201ENSMUST00000117007 127 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm13811-201ENSMUST00000117800 256 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm15951-201ENSMUST00000118377 400 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm11219-201ENSMUST00000118565 358 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm14267-201ENSMUST00000119751 496 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm14815-201ENSMUST00000120060 488 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm13338-201ENSMUST00000120235 361 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm13493-201ENSMUST00000120318 493 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm25970-201ENSMUST00000157165 86 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm23894-201ENSMUST00000158107 313 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm26988-201ENSMUST00000183296 945 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm28188-201ENSMUST00000190483 236 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Mir6994-201ENSMUST00000198985 73 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm43554-201ENSMUST00000199987 186 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm18007-201ENSMUST00000205019 844 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm45596-201ENSMUST00000209279 434 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm35558-203ENSMUST00000222264 204 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Prpf38bQ80SY5 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm24989-201ENSMUST00000104461 88 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm13604-201ENSMUST00000119332 482 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm11254-201ENSMUST00000122368 653 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm4487-201ENSMUST00000150617 442 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm24175-201ENSMUST00000158931 129 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Mir6943-201ENSMUST00000185186 66 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm36984-201ENSMUST00000192770 235 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm43214-201ENSMUST00000199242 352 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm29778-201ENSMUST00000201667 466 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm7825-201ENSMUST00000204046 416 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm44048-201ENSMUST00000204531 361 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Gm45724-201ENSMUST00000213031 420 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Prpf38bQ80SY5 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms