Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm8666-201ENSMUST00000117517 292 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 n-R5s45-201ENSMUST00000122592 110 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm22116-201ENSMUST00000158791 141 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm16558-201ENSMUST00000163015 532 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm29588-201ENSMUST00000185738 298 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm29563-201ENSMUST00000187249 496 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm18183-201ENSMUST00000191024 615 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm37501-201ENSMUST00000192830 691 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm43855-201ENSMUST00000197462 507 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Neat1-201ENSMUST00000173672 20771 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.26□□□□□ -1.57
Trim58Q5NCC9 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Trim58Q5NCC9 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm22472-201ENSMUST00000104115 134 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm12261-201ENSMUST00000117499 645 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm13333-201ENSMUST00000119424 781 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Mir5106-201ENSMUST00000174936 73 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm5368-201ENSMUST00000189012 589 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm37490-201ENSMUST00000195566 724 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm3148-201ENSMUST00000203594 612 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim58Q5NCC9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Mir290a-201ENSMUST00000104627 83 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm14586-201ENSMUST00000119571 408 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm11281-201ENSMUST00000141391 576 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm24690-201ENSMUST00000157759 97 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm5058-201ENSMUST00000187331 463 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm37676-201ENSMUST00000195496 507 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm5418-201ENSMUST00000206932 528 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim58Q5NCC9 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.24□□□□□ -1.57
Trim58Q5NCC9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms