Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm1866-201ENSMUST00000120701 477 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm22958-201ENSMUST00000122512 184 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm23496-201ENSMUST00000157741 248 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm27636-201ENSMUST00000184528 122 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm28471-201ENSMUST00000185994 615 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm8498-201ENSMUST00000188227 974 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm37272-201ENSMUST00000193401 488 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm18997-201ENSMUST00000216353 822 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm46998-201ENSMUST00000221444 330 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.61□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Mir676-201ENSMUST00000102443 89 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm14107-201ENSMUST00000117774 330 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm14103-201ENSMUST00000119075 366 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm25713-201ENSMUST00000158625 109 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Mir5106-201ENSMUST00000174936 73 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm29148-201ENSMUST00000188140 336 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm37601-201ENSMUST00000194922 394 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm43559-201ENSMUST00000198755 466 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm44002-201ENSMUST00000205134 594 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm5548-201ENSMUST00000055878 397 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm25592-201ENSMUST00000082635 131 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Upf3aQ3ULJ3 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm25169-201ENSMUST00000104190 129 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm6584-201ENSMUST00000119671 447 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm25177-201ENSMUST00000122634 117 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm25908-201ENSMUST00000157624 98 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Trbv10-201ENSMUST00000168322 289 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm29484-201ENSMUST00000186067 324 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm6075-201ENSMUST00000186816 486 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Mir129b-201ENSMUST00000197461 65 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Gm9245-201ENSMUST00000200528 983 ntBASIC4.59□□□□□ -1.67
Upf3aQ3ULJ3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms