Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mir6899-201ENSMUST00000184798 64 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm28263-201ENSMUST00000185884 400 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm37836-201ENSMUST00000195875 175 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm43774-201ENSMUST00000196327 878 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm45078-201ENSMUST00000205343 546 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Synpr-207ENSMUST00000223583 3362 ntBASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Trafd1Q3UDK1 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm12190-201ENSMUST00000120001 187 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm13932-201ENSMUST00000120873 610 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm13808-201ENSMUST00000121353 184 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm14122-201ENSMUST00000122076 973 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm14840-201ENSMUST00000122135 594 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm5392-201ENSMUST00000122189 789 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm23906-201ENSMUST00000157573 128 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm25427-201ENSMUST00000157605 103 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm4842-201ENSMUST00000183237 835 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm28847-201ENSMUST00000186778 700 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Trafd1Q3UDK1 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Mir92b-201ENSMUST00000102300 83 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm11262-201ENSMUST00000119326 833 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm11398-201ENSMUST00000120330 320 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm13000-201ENSMUST00000120937 496 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm13220-201ENSMUST00000121535 508 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm16250-201ENSMUST00000148974 256 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm23465-201ENSMUST00000157134 262 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm37050-201ENSMUST00000193464 466 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm43730-201ENSMUST00000199863 372 ntBASIC4.34□□□□□ -1.71
Trafd1Q3UDK1 Gm43028-201ENSMUST00000202561 481 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms