Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.16□□□□□ -1.58
Usp39Q3TIX9 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.16□□□□□ -1.58
Usp39Q3TIX9 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Usp39Q3TIX9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Usp39Q3TIX9 Gm25758-201ENSMUST00000103987 129 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm24789-201ENSMUST00000104282 131 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm24835-201ENSMUST00000116777 111 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm7974-201ENSMUST00000117154 408 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm7834-201ENSMUST00000117560 437 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm14887-201ENSMUST00000119522 663 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm15193-201ENSMUST00000120224 865 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm15111-201ENSMUST00000122142 878 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm25898-201ENSMUST00000158303 106 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm25603-201ENSMUST00000158361 105 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm26468-201ENSMUST00000158644 106 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Mir6539-201ENSMUST00000183732 110 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm27332-201ENSMUST00000184893 112 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm28343-201ENSMUST00000185386 112 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm19694-201ENSMUST00000192364 505 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm19936-201ENSMUST00000216414 838 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 AV026068-237ENSMUST00000226075 572 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm10064-201ENSMUST00000071235 399 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm25403-201ENSMUST00000082971 143 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm24921-201ENSMUST00000083024 107 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Usp39Q3TIX9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm16082-201ENSMUST00000115992 377 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm11971-201ENSMUST00000117715 288 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm12294-201ENSMUST00000119723 490 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm13865-201ENSMUST00000120957 865 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm13738-201ENSMUST00000122437 469 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm25861-201ENSMUST00000158251 109 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm24295-201ENSMUST00000158298 131 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm15838-201ENSMUST00000161575 180 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm15812-201ENSMUST00000162331 748 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm17907-201ENSMUST00000173150 710 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm22411-201ENSMUST00000175462 126 ntBASIC5.14□□□□□ -1.59
Usp39Q3TIX9 Gm22002-201ENSMUST00000175622 125 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms