Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cux1P53564 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cux1P53564 Gm4736-201ENSMUST00000100870 380 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Gm11393-201ENSMUST00000118019 288 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Gm2862-201ENSMUST00000161524 328 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Mir6385-201ENSMUST00000184295 105 ntBASIC6.37□□□□□ -1.39
Cux1P53564 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC6.37□□□□□ -1.39
Cux1P53564 Gm19503-201ENSMUST00000187109 241 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Gm18120-201ENSMUST00000220079 511 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Gm18116-201ENSMUST00000220920 537 ntBASIC6.37□□□□□ -1.39
Cux1P53564 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cux1P53564 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cux1P53564 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
Cux1P53564 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cux1P53564 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cux1P53564 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC6.36□□□□□ -1.39
Cux1P53564 Gm18429-201ENSMUST00000198707 421 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Gm8745-201ENSMUST00000207846 782 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC6.36□□□□□ -1.39
Cux1P53564 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cux1P53564 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Gm44433-201ENSMUST00000203540 4832 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Cux1P53564 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.36□□□□□ -1.39
Cux1P53564 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Cux1P53564 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.36□□□□□ -1.39
Cux1P53564 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Cux1P53564 Gm11829-201ENSMUST00000121003 282 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm12087-201ENSMUST00000121878 258 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC6.35□□□□□ -1.39
Cux1P53564 Gm38098-201ENSMUST00000194115 241 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm44879-201ENSMUST00000207007 503 ntBASIC6.35□□□□□ -1.39
Cux1P53564 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC6.35□□□□□ -1.39
Cux1P53564 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cux1P53564 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.35□□□□□ -1.39
Cux1P53564 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Cux1P53564 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 Gm5133-201ENSMUST00000118940 1255 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm23168-201ENSMUST00000157156 143 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm26373-201ENSMUST00000157833 103 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm23084-201ENSMUST00000157850 114 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm24730-201ENSMUST00000158228 117 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm10067-201ENSMUST00000179462 348 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.35□□□□□ -1.39
Cux1P53564 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cux1P53564 Gm21803-201ENSMUST00000188897 693 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC6.35□□□□□ -1.39
Cux1P53564 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.35□□□□□ -1.39
Cux1P53564 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC6.35□□□□□ -1.39
Cux1P53564 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Cux1P53564 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cux1P53564 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Gm38253-201ENSMUST00000194058 4678 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Cux1P53564 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC6.34□□□□□ -1.39
Cux1P53564 AC101945.4-201ENSMUST00000228464 1976 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Cux1P53564 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Cux1P53564 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cux1P53564 Gm24987-201ENSMUST00000104453 134 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Cux1P53564 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.34□□□□□ -1.39
Cux1P53564 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.34□□□□□ -1.39
Cux1P53564 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cux1P53564 Gm24314-201ENSMUST00000158274 123 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Gm43424-201ENSMUST00000200484 253 ntBASIC6.34□□□□□ -1.39
Cux1P53564 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cux1P53564 AC154677.1-201ENSMUST00000227636 2805 ntBASIC6.34□□□□□ -1.4
Cux1P53564 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm37655-201ENSMUST00000193968 4123 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm42616-201ENSMUST00000198989 4184 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.33□□□□□ -1.4
Cux1P53564 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Cux1P53564 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cux1P53564 Gm23271-201ENSMUST00000104052 124 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm11372-201ENSMUST00000117348 570 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC6.33□□□□□ -1.4
Cux1P53564 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.33□□□□□ -1.4
Cux1P53564 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC6.33□□□□□ -1.4
Cux1P53564 Gm27189-201ENSMUST00000184119 190 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms