Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Mir883a-201ENSMUST00000104824 76 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm13454-201ENSMUST00000118166 483 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm11268-201ENSMUST00000118347 267 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm15332-201ENSMUST00000118386 357 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm11848-201ENSMUST00000121207 973 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm7931-201ENSMUST00000121537 271 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.69□□□□□ -1.34
Rfx1P48377 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm24477-201ENSMUST00000157438 103 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm24901-201ENSMUST00000158125 110 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm6486-201ENSMUST00000166202 434 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Cfap61-214ENSMUST00000167179 183 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm4152-201ENSMUST00000172675 259 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm20701-201ENSMUST00000176082 347 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC6.69□□□□□ -1.34
Rfx1P48377 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm38329-201ENSMUST00000193473 427 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm18971-201ENSMUST00000197240 374 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm9278-201ENSMUST00000205508 553 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm7413-201ENSMUST00000219498 462 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
Rfx1P48377 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm22977-201ENSMUST00000082615 107 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm24622-201ENSMUST00000082619 162 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx1P48377 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.69□□□□□ -1.34
Rfx1P48377 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.69□□□□□ -1.34
Rfx1P48377 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm45262-201ENSMUST00000209917 1463 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm25795-201ENSMUST00000104421 132 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Rfx1P48377 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm8757-201ENSMUST00000119660 372 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm11369-201ENSMUST00000120812 318 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm12110-201ENSMUST00000121601 579 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm6872-201ENSMUST00000165001 700 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm24407-201ENSMUST00000177864 141 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm20811-201ENSMUST00000190500 553 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.68□□□□□ -1.34
Rfx1P48377 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm19089-201ENSMUST00000197207 613 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm5551-201ENSMUST00000199720 690 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm43233-201ENSMUST00000200491 616 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.68□□□□□ -1.34
Rfx1P48377 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 CT025157.1-201ENSMUST00000226241 292 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Rfx1P48377 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Rfx1P48377 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.68□□□□□ -1.34
Rfx1P48377 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Rfx1P48377 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx1P48377 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms