Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm28267-201ENSMUST00000191093 265 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm37601-201ENSMUST00000194922 394 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm43853-201ENSMUST00000197162 301 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm5885-202ENSMUST00000203357 528 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.12□□□□□ -1.75
Cdx2P43241 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Cdx2P43241 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cdx2P43241 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.12□□□□□ -1.75
Cdx2P43241 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cdx2P43241 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cdx2P43241 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Cdx2P43241 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm23098-201ENSMUST00000157552 299 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm23782-201ENSMUST00000157939 120 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm3339-201ENSMUST00000163462 475 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdx2P43241 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm6075-201ENSMUST00000186816 486 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm18698-201ENSMUST00000192327 668 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm4248-201ENSMUST00000196905 316 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm44389-201ENSMUST00000203795 182 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx2P43241 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cdx2P43241 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.11□□□□□ -1.75
Cdx2P43241 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cdx2P43241 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cdx2P43241 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Cdx2P43241 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdx2P43241 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm23319-201ENSMUST00000104467 131 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm11406-201ENSMUST00000117418 484 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm14539-201ENSMUST00000117527 174 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm15799-201ENSMUST00000120899 289 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm24690-201ENSMUST00000157759 97 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdx2P43241 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdx2P43241 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Mir713-201ENSMUST00000178651 108 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 Gm26983-201ENSMUST00000182051 388 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm44261-201ENSMUST00000203337 209 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm7468-201ENSMUST00000203900 652 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm8820-201ENSMUST00000204077 571 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cdx2P43241 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Gm26063-201ENSMUST00000083378 107 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Mir504-201ENSMUST00000093602 79 ntBASIC4.1□□□□□ -1.75
Cdx2P43241 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdx2P43241 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cdx2P43241 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.1□□□□□ -1.75
Cdx2P43241 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms