Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.13□□□□□ -1.75
Sox6P40645 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Sox6P40645 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm12520-201ENSMUST00000117493 316 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm15780-201ENSMUST00000121283 935 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm6969-201ENSMUST00000140065 342 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm2389-201ENSMUST00000160487 189 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox6P40645 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm21241-201ENSMUST00000179551 934 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm27044-201ENSMUST00000183033 796 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm28923-201ENSMUST00000187755 322 ntBASIC4.13□□□□□ -1.75
Sox6P40645 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm20819-201ENSMUST00000191091 925 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm20871-201ENSMUST00000191322 931 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm18791-201ENSMUST00000204611 726 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm45006-201ENSMUST00000206078 690 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm19181-201ENSMUST00000218891 940 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm46191-201ENSMUST00000218899 433 ntBASIC4.13□□□□□ -1.75
Sox6P40645 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.13□□□□□ -1.75
Sox6P40645 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.13□□□□□ -1.75
Sox6P40645 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.13□□□□□ -1.75
Sox6P40645 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox6P40645 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Sox6P40645 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.13□□□□□ -1.75
Sox6P40645 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sox6P40645 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
Sox6P40645 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sox6P40645 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Sox6P40645 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.12□□□□□ -1.75
Sox6P40645 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Sox6P40645 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Sox6P40645 Gm22498-201ENSMUST00000104497 86 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm12564-201ENSMUST00000119860 321 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm14977-201ENSMUST00000121626 812 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm14122-201ENSMUST00000122076 973 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.12□□□□□ -1.75
Sox6P40645 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox6P40645 Gm4412-201ENSMUST00000186660 433 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Sox6P40645 Gm28625-201ENSMUST00000188309 205 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm23925-202ENSMUST00000188429 132 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm43586-201ENSMUST00000195948 310 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm8069-201ENSMUST00000197887 154 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm43028-201ENSMUST00000202561 481 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm4290-201ENSMUST00000206897 814 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm20586-201ENSMUST00000210122 547 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm45359-201ENSMUST00000210635 427 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Gm45857-201ENSMUST00000212207 356 ntBASIC4.12□□□□□ -1.75
Sox6P40645 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.12□□□□□ -1.75
Sox6P40645 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.12□□□□□ -1.75
Sox6P40645 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.12□□□□□ -1.75
Sox6P40645 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.12□□□□□ -1.75
Sox6P40645 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox6P40645 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sox6P40645 Gm22826-201ENSMUST00000083774 165 ntBASIC4.12□□□□□ -1.75
Sox6P40645 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.12□□□□□ -1.75
Sox6P40645 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sox6P40645 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms