Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.36□□□□□ -1.55
Traf1P39428 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.36□□□□□ -1.55
Traf1P39428 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.36□□□□□ -1.55
Traf1P39428 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.36□□□□□ -1.55
Traf1P39428 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.36□□□□□ -1.55
Traf1P39428 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Traf1P39428 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Traf1P39428 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Traf1P39428 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.36□□□□□ -1.55
Traf1P39428 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Traf1P39428 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Traf1P39428 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Gm15752-201ENSMUST00000117427 394 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm14878-201ENSMUST00000118167 293 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Traf1P39428 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Gm3084-201ENSMUST00000169967 598 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm21991-201ENSMUST00000180006 508 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm4557-201ENSMUST00000185826 907 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm4526-201ENSMUST00000186039 920 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm8708-201ENSMUST00000188500 906 ntBASIC5.35□□□□□ -1.55
Traf1P39428 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.35□□□□□ -1.55
Traf1P39428 Gm17790-201ENSMUST00000191545 1228 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm37837-201ENSMUST00000191743 604 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.35□□□□□ -1.55
Traf1P39428 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Traf1P39428 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Traf1P39428 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.35□□□□□ -1.55
Traf1P39428 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Traf1P39428 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Traf1P39428 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Traf1P39428 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Traf1P39428 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Gm25726-201ENSMUST00000104529 129 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm12230-201ENSMUST00000118301 454 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm14688-201ENSMUST00000119169 303 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm12379-201ENSMUST00000119607 391 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm12001-201ENSMUST00000121727 913 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Gm24689-201ENSMUST00000157760 104 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm25553-201ENSMUST00000158076 79 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Traf1P39428 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Gm20701-201ENSMUST00000176082 347 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm22243-201ENSMUST00000178754 120 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Mir6391-201ENSMUST00000184391 104 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm27805-201ENSMUST00000184513 79 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm3145-201ENSMUST00000188584 220 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Gm31532-201ENSMUST00000203555 767 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Gm6988-201ENSMUST00000222676 375 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.34□□□□□ -1.55
Traf1P39428 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.34□□□□□ -1.55
Traf1P39428 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Traf1P39428 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Traf1P39428 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Traf1P39428 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Traf1P39428 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Traf1P39428 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms