Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.75□□□□□ -1.65
Lire1P11260 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm22859-201ENSMUST00000174978 122 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm27543-201ENSMUST00000183562 177 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm29588-201ENSMUST00000185738 298 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm36964-201ENSMUST00000191876 198 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm19418-201ENSMUST00000197436 580 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm44776-201ENSMUST00000207212 381 ntBASIC4.75□□□□□ -1.65
Lire1P11260 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.75□□□□□ -1.65
Lire1P11260 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.75□□□□□ -1.65
Lire1P11260 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Lire1P11260 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Lire1P11260 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lire1P11260 Gm22456-201ENSMUST00000082578 125 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Mir17-201ENSMUST00000083574 84 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lire1P11260 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lire1P11260 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.75□□□□□ -1.65
Lire1P11260 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.75□□□□□ -1.65
Lire1P11260 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lire1P11260 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Gm24160-201ENSMUST00000104594 126 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.74□□□□□ -1.65
Lire1P11260 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Gm13419-201ENSMUST00000121711 271 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm23883-201ENSMUST00000122686 290 ntBASIC4.74□□□□□ -1.65
Lire1P11260 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Gm23327-201ENSMUST00000157420 78 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm25185-201ENSMUST00000157754 96 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Gm8214-201ENSMUST00000172123 351 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Mir6963-201ENSMUST00000183535 71 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm27580-201ENSMUST00000183666 149 ntBASIC4.74□□□□□ -1.65
Lire1P11260 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lire1P11260 Gm37243-201ENSMUST00000193407 595 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm37444-201ENSMUST00000193605 439 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm43316-201ENSMUST00000197252 1295 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Lire1P11260 Gm7688-201ENSMUST00000212857 337 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm21041-201ENSMUST00000214829 823 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.74□□□□□ -1.65
Lire1P11260 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.74□□□□□ -1.65
Lire1P11260 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.74□□□□□ -1.65
Lire1P11260 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Lire1P11260 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Gm22741-201ENSMUST00000083438 165 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lire1P11260 Smc5-206ENSMUST00000226111 3265 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.74□□□□□ -1.65
Lire1P11260 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lire1P11260 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.73□□□□□ -1.65
Lire1P11260 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Lire1P11260 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Lire1P11260 Gm24544-201ENSMUST00000103862 110 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm24429-201ENSMUST00000104076 132 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Mir879-201ENSMUST00000104703 76 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm15560-201ENSMUST00000117107 643 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm15382-201ENSMUST00000118011 537 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm15480-201ENSMUST00000120442 519 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Lire1P11260 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.73□□□□□ -1.65
Lire1P11260 Gm22383-201ENSMUST00000158188 327 ntBASIC4.73□□□□□ -1.65
Lire1P11260 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms