Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm25271-201ENSMUST00000157273 290 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm23633-201ENSMUST00000175293 119 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm29228-201ENSMUST00000185489 418 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm37050-201ENSMUST00000193464 466 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm37670-201ENSMUST00000193622 229 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Chmp6P0C0A3 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm14750-201ENSMUST00000118262 516 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm12087-201ENSMUST00000121878 258 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm27883-201ENSMUST00000183941 102 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm20203-201ENSMUST00000192352 332 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm37601-201ENSMUST00000194922 394 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm18877-201ENSMUST00000207706 539 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm45458-201ENSMUST00000209900 522 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Chmp6P0C0A3 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm22657-201ENSMUST00000104197 132 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm7834-201ENSMUST00000117560 437 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm12719-201ENSMUST00000118859 241 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm4852-201ENSMUST00000121202 729 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm15780-201ENSMUST00000121283 935 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm10059-201ENSMUST00000131139 171 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm9320-201ENSMUST00000184151 473 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm42830-201ENSMUST00000196642 313 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm43028-201ENSMUST00000202561 481 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm43580-201ENSMUST00000202892 284 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm43925-201ENSMUST00000203498 206 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm44389-201ENSMUST00000203795 182 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 Gm19366-201ENSMUST00000206996 156 ntBASIC4.69□□□□□ -1.66
Chmp6P0C0A3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms