Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm26028-201ENSMUST00000158660 294 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Mir7022-201ENSMUST00000183749 61 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Dlx6os1-204ENSMUST00000184182 146 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm27940-201ENSMUST00000184449 98 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29320-201ENSMUST00000185235 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29031-201ENSMUST00000185316 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29000-201ENSMUST00000185444 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm28204-201ENSMUST00000185934 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29179-202ENSMUST00000186138 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm28290-201ENSMUST00000186505 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm28161-201ENSMUST00000186669 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29448-201ENSMUST00000186675 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29314-201ENSMUST00000186800 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm28253-202ENSMUST00000187971 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm28749-209ENSMUST00000189599 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm29169-201ENSMUST00000189835 615 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm37050-201ENSMUST00000193464 466 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm33163-201ENSMUST00000194504 614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Hmgb3O54879 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm24525-201ENSMUST00000082917 151 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Hmgb3O54879 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm28322-201ENSMUST00000185627 1475 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm15297-201ENSMUST00000117795 290 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm7189-201ENSMUST00000119811 429 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm11866-201ENSMUST00000120209 335 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm11398-201ENSMUST00000120330 320 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Clec2f-201ENSMUST00000121051 374 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm11909-201ENSMUST00000121424 759 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Mir3080-201ENSMUST00000175010 79 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm3307-201ENSMUST00000176164 632 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm21960-201ENSMUST00000181924 452 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm27636-201ENSMUST00000184528 122 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm5368-201ENSMUST00000189012 589 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm38008-201ENSMUST00000195333 518 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm2691-201ENSMUST00000203205 901 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm44845-201ENSMUST00000208773 335 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm40692-201ENSMUST00000220411 491 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 AC132446.1-201ENSMUST00000222655 226 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 AC160114.2-201ENSMUST00000223021 300 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.42□□□□□ -1.86
Hmgb3O54879 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Hmgb3O54879 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Hmgb3O54879 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Hmgb3O54879 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.42□□□□□ -1.86
Hmgb3O54879 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm15073-201ENSMUST00000117432 634 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm12719-201ENSMUST00000118859 241 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm27896-201ENSMUST00000175162 317 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Hmgb3O54879 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm5252-201ENSMUST00000189030 909 ntBASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC3.41□□□□□ -1.86
Hmgb3O54879 Gm29138-201ENSMUST00000191444 348 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms