Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm36931-201ENSMUST00000192997 4801 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm15426-201ENSMUST00000117823 556 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm13887-201ENSMUST00000119009 344 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm14067-201ENSMUST00000119340 314 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm13459-201ENSMUST00000121558 646 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm14122-201ENSMUST00000122076 973 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm18415-201ENSMUST00000177464 647 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm8221-201ENSMUST00000178052 564 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm18406-201ENSMUST00000185872 669 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm29086-201ENSMUST00000186774 222 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm29085-201ENSMUST00000187108 225 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm29534-201ENSMUST00000187328 382 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm28467-201ENSMUST00000190981 318 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm8069-201ENSMUST00000197887 154 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Diaph3-206ENSMUST00000226745 713 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 AC154806.4-201ENSMUST00000227406 439 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm24144-201ENSMUST00000082632 111 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Gm7269-201ENSMUST00000210819 1373 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.48□□□□□ -1.85
Tnfsf11O35235 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Tnfsf11O35235 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm14163-201ENSMUST00000117342 217 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm11673-201ENSMUST00000117846 331 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm11433-201ENSMUST00000118318 228 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm11822-201ENSMUST00000119177 415 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm13815-201ENSMUST00000119963 412 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm13537-201ENSMUST00000120467 267 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm14589-201ENSMUST00000121640 727 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm11804-201ENSMUST00000121663 468 ntBASIC3.47□□□□□ -1.85
Tnfsf11O35235 Gm5924-201ENSMUST00000132554 871 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms