Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm14082-201ENSMUST00000118582 801 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm12607-201ENSMUST00000120724 493 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm26352-201ENSMUST00000158223 125 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm27976-201ENSMUST00000183635 162 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm29086-201ENSMUST00000186774 222 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm29085-201ENSMUST00000187108 225 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm37243-201ENSMUST00000193407 595 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm44539-201ENSMUST00000206010 238 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.73□□□□□ -1.33
NpcdF8VQB8 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NpcdF8VQB8 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm25876-201ENSMUST00000104329 119 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm14785-201ENSMUST00000120185 539 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm14651-201ENSMUST00000147192 442 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm22789-201ENSMUST00000157884 130 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm10784-201ENSMUST00000178715 238 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm21850-201ENSMUST00000179792 359 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Mir6400-201ENSMUST00000184870 92 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm2914-201ENSMUST00000186120 328 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm18296-201ENSMUST00000192475 783 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm43035-201ENSMUST00000197626 517 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm44910-201ENSMUST00000208451 396 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm20786-201ENSMUST00000212649 436 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm22350-201ENSMUST00000083924 156 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.72□□□□□ -1.33
NpcdF8VQB8 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NpcdF8VQB8 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.71□□□□□ -1.33
NpcdF8VQB8 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.71□□□□□ -1.33
NpcdF8VQB8 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
NpcdF8VQB8 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NpcdF8VQB8 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NpcdF8VQB8 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.71□□□□□ -1.33
NpcdF8VQB8 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NpcdF8VQB8 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC6.71□□□□□ -1.34
NpcdF8VQB8 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NpcdF8VQB8 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NpcdF8VQB8 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms