Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 AC159193.1-201ENSMUST00000222872 2517 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm25376-201ENSMUST00000104340 133 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm14575-201ENSMUST00000117210 560 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm13785-201ENSMUST00000119099 690 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm12458-201ENSMUST00000119387 495 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm38098-201ENSMUST00000194115 241 ntBASIC3.5□□□□□ -1.85
Col6a4A2AX52 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a4A2AX52 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Col6a4A2AX52 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm4736-201ENSMUST00000100870 380 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm12719-201ENSMUST00000118859 241 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm11598-201ENSMUST00000119257 357 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm37173-201ENSMUST00000194498 1017 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm7468-201ENSMUST00000203900 652 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm17829-201ENSMUST00000219782 344 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 AC170999.2-201ENSMUST00000226223 264 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 CT025710.1-201ENSMUST00000222949 2533 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm23084-201ENSMUST00000157850 114 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm8919-201ENSMUST00000182028 1014 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm37603-201ENSMUST00000192368 219 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm7381-201ENSMUST00000098958 300 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Gm20667-201ENSMUST00000175674 1930 ntBASIC3.49□□□□□ -1.85
Col6a4A2AX52 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col6a4A2AX52 AC122357.1-201ENSMUST00000221652 1515 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm15018-201ENSMUST00000117090 633 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm14365-201ENSMUST00000117535 587 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm22718-201ENSMUST00000122701 315 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm23496-201ENSMUST00000157741 248 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm25846-201ENSMUST00000158013 135 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm27828-201ENSMUST00000184108 119 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm27899-201ENSMUST00000184715 64 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm36964-201ENSMUST00000191876 198 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm42566-201ENSMUST00000197120 643 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm44463-201ENSMUST00000198895 137 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm44681-201ENSMUST00000208447 842 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm26273-201ENSMUST00000104180 131 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm22590-201ENSMUST00000104247 128 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm6027-201ENSMUST00000121467 756 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms