Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm18871-201ENSMUST00000218655 745 ntBASIC4.05□□□□□ -1.76
CtcflA2APF3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.05□□□□□ -1.76
CtcflA2APF3 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.05□□□□□ -1.76
CtcflA2APF3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CtcflA2APF3 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.05□□□□□ -1.76
CtcflA2APF3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Gm23300-201ENSMUST00000082712 125 ntBASIC4.05□□□□□ -1.76
CtcflA2APF3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcflA2APF3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CtcflA2APF3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcflA2APF3 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CtcflA2APF3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CtcflA2APF3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm14605-201ENSMUST00000120599 268 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm13430-201ENSMUST00000121366 288 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm12358-201ENSMUST00000121842 520 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm25669-201ENSMUST00000157699 112 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm29000-201ENSMUST00000185444 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28204-201ENSMUST00000185934 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28290-201ENSMUST00000186505 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28161-201ENSMUST00000186669 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm5368-201ENSMUST00000189012 589 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28749-209ENSMUST00000189599 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm33163-201ENSMUST00000194504 614 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Mir1892-201ENSMUST00000197752 80 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Mir6994-201ENSMUST00000198985 73 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.04□□□□□ -1.76
CtcflA2APF3 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm6776-201ENSMUST00000057752 900 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm23796-201ENSMUST00000084011 160 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.04□□□□□ -1.76
CtcflA2APF3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CtcflA2APF3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CtcflA2APF3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CtcflA2APF3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm24578-201ENSMUST00000103970 129 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm11346-201ENSMUST00000118346 704 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm11262-201ENSMUST00000119326 833 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm15171-201ENSMUST00000122191 334 ntBASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.03□□□□□ -1.76
CtcflA2APF3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.03□□□□□ -1.76
CtcflA2APF3 Gm23700-201ENSMUST00000158842 102 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms