Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm24142-201ENSMUST00000101960 107 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26143-201ENSMUST00000104480 108 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm14304-201ENSMUST00000117272 446 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm26085-201ENSMUST00000157900 116 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm22312-201ENSMUST00000158005 130 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm4842-201ENSMUST00000183237 835 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm28614-201ENSMUST00000186483 458 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Trdv3-201ENSMUST00000198551 309 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm43710-201ENSMUST00000199583 452 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm4714-201ENSMUST00000203395 279 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm45458-201ENSMUST00000209900 522 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Gm18193-201ENSMUST00000210017 772 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 AC165437.1-201ENSMUST00000228640 536 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Mir504-201ENSMUST00000093602 79 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb2S4R1M3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm7350-201ENSMUST00000120964 636 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm8200-201ENSMUST00000122390 222 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm22600-201ENSMUST00000157598 269 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm24675-201ENSMUST00000158757 259 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm18128-201ENSMUST00000172625 511 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Mir3062-201ENSMUST00000174986 105 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Mir6418-201ENSMUST00000185075 115 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm43276-201ENSMUST00000199712 364 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm29815-201ENSMUST00000202418 178 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm18791-201ENSMUST00000204611 726 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm45081-201ENSMUST00000206281 572 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm45200-201ENSMUST00000207434 919 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm18377-201ENSMUST00000215141 607 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Mecom-201ENSMUST00000061088 348 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.3□□□□□ -1.72
H2afb2S4R1M3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
H2afb2S4R1M3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Mir466i-201ENSMUST00000116924 121 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm14610-201ENSMUST00000118358 966 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm5754-201ENSMUST00000118774 892 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm2182-201ENSMUST00000145243 663 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Gm26355-201ENSMUST00000158220 105 ntBASIC4.29□□□□□ -1.72
H2afb2S4R1M3 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms