Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm23300-201ENSMUST00000082712 125 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim3Q9R1R2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.29□□□□□ -1.72
Trim3Q9R1R2 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Fus-202ENSMUST00000079045 2623 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm12112-201ENSMUST00000117772 231 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm14107-201ENSMUST00000117774 330 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm12186-201ENSMUST00000119050 945 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm15212-201ENSMUST00000122403 466 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm24113-201ENSMUST00000157477 276 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm25923-201ENSMUST00000158312 138 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm24636-201ENSMUST00000158673 288 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm20428-201ENSMUST00000174365 283 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm25534-201ENSMUST00000175365 125 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Mir7022-201ENSMUST00000183749 61 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Mir6398-201ENSMUST00000184541 102 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm27387-201ENSMUST00000184583 116 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm4557-201ENSMUST00000185826 907 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm4526-201ENSMUST00000186039 920 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm29086-201ENSMUST00000186774 222 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm29085-201ENSMUST00000187108 225 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm8708-201ENSMUST00000188500 906 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Mir142-201ENSMUST00000198092 64 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm44234-201ENSMUST00000204246 900 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm44232-201ENSMUST00000204537 225 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm44138-201ENSMUST00000204939 271 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm18306-201ENSMUST00000207338 569 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm44849-201ENSMUST00000207595 484 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm45236-201ENSMUST00000208632 229 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr881-201ENSMUST00000074611 948 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.28□□□□□ -1.72
Trim3Q9R1R2 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Trim3Q9R1R2 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm12062-201ENSMUST00000117533 259 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm7834-201ENSMUST00000117560 437 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm12465-201ENSMUST00000118591 300 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm13815-201ENSMUST00000119963 412 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm12237-201ENSMUST00000120158 470 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm15480-201ENSMUST00000120442 519 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm13000-201ENSMUST00000120937 496 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm11350-201ENSMUST00000121436 870 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm14784-201ENSMUST00000121604 663 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm10074-201ENSMUST00000174543 249 ntBASIC4.27□□□□□ -1.73
Trim3Q9R1R2 Gm27864-201ENSMUST00000183704 190 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms