Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm9134-201ENSMUST00000193186 551 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm44343-201ENSMUST00000196702 90 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm17811-201ENSMUST00000206193 387 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm44571-201ENSMUST00000208092 533 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm45359-201ENSMUST00000210635 427 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm24166-201ENSMUST00000082724 135 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Gm22684-201ENSMUST00000082849 132 ntBASIC4.07□□□□□ -1.76
Trem1Q9JKE2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trem1Q9JKE2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm23942-201ENSMUST00000101956 107 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm25537-201ENSMUST00000103851 109 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm24170-201ENSMUST00000104124 133 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm24789-201ENSMUST00000104282 131 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm8051-201ENSMUST00000120464 466 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm16259-201ENSMUST00000145241 553 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm23669-201ENSMUST00000157470 128 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm25246-201ENSMUST00000175476 69 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm10784-201ENSMUST00000178715 238 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm8807-201ENSMUST00000179328 492 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm27653-201ENSMUST00000185037 136 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm29284-201ENSMUST00000188363 255 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm37203-201ENSMUST00000191618 385 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm44869-201ENSMUST00000208836 357 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm18705-201ENSMUST00000215985 913 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Mir202-201ENSMUST00000083568 72 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trem1Q9JKE2 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm25419-201ENSMUST00000104215 191 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm13579-201ENSMUST00000118519 517 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm15385-201ENSMUST00000118725 667 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm11677-201ENSMUST00000121349 977 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm15959-201ENSMUST00000121724 368 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm14907-201ENSMUST00000121948 854 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm8221-201ENSMUST00000178052 564 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 Gm27210-201ENSMUST00000184263 402 ntBASIC4.05□□□□□ -1.76
Trem1Q9JKE2 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
Trem1Q9JKE2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms