Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm36994-201ENSMUST00000192941 492 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm38221-201ENSMUST00000195146 365 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm43730-201ENSMUST00000199863 372 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm44765-201ENSMUST00000206927 601 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm7045-201ENSMUST00000221466 605 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lima1Q9ERG0 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm23014-201ENSMUST00000104144 130 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm12719-201ENSMUST00000118859 241 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm24380-201ENSMUST00000122696 324 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm28500-201ENSMUST00000190286 151 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lima1Q9ERG0 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm11432-201ENSMUST00000117334 231 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm12340-201ENSMUST00000121617 462 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm22177-201ENSMUST00000175002 158 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm9499-201ENSMUST00000180888 964 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm44817-201ENSMUST00000205416 453 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm45499-201ENSMUST00000211656 280 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lima1Q9ERG0 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms