Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdc40Q9DC48 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm13733-201ENSMUST00000117290 535 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm14067-201ENSMUST00000119340 314 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm13932-201ENSMUST00000120873 610 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm5391-201ENSMUST00000121155 613 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm23501-201ENSMUST00000157744 256 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm15796-201ENSMUST00000162135 204 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm19427-201ENSMUST00000183619 208 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm8069-201ENSMUST00000197887 154 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm17956-201ENSMUST00000199931 838 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm44038-201ENSMUST00000203952 889 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm44879-201ENSMUST00000207007 503 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm44852-201ENSMUST00000207950 369 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm18442-201ENSMUST00000220925 639 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Mecom-201ENSMUST00000061088 348 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Snord22-201ENSMUST00000083153 126 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Cdc40Q9DC48 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Mir92b-201ENSMUST00000102300 83 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm25427-201ENSMUST00000157605 103 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm24689-201ENSMUST00000157760 104 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm17711-201ENSMUST00000172028 237 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm27414-201ENSMUST00000185033 381 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm45081-201ENSMUST00000206281 572 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Cdc40Q9DC48 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.15□□□□□ -1.74
Cdc40Q9DC48 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Cdc40Q9DC48 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Cdc40Q9DC48 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cdc40Q9DC48 Gm22493-201ENSMUST00000104494 132 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms