Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm26376-201ENSMUST00000104784 110 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm12073-201ENSMUST00000117382 524 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm14854-201ENSMUST00000117758 841 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm15267-201ENSMUST00000120888 464 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm12372-201ENSMUST00000121654 768 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm25106-201ENSMUST00000122672 134 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm16259-201ENSMUST00000145241 553 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm22339-201ENSMUST00000157718 62 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm17421-201ENSMUST00000167845 674 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm17153-201ENSMUST00000171314 490 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm23799-201ENSMUST00000175559 120 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm28385-201ENSMUST00000185671 292 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm28389-201ENSMUST00000190090 697 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm38166-201ENSMUST00000191660 471 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm6546-201ENSMUST00000192096 766 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm44773-201ENSMUST00000207374 557 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Vps28Q9D1C8 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Vps28Q9D1C8 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.9□□□□□ -1.62
Vps28Q9D1C8 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Vps28Q9D1C8 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Vps28Q9D1C8 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Vps28Q9D1C8 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Vps28Q9D1C8 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm15560-201ENSMUST00000117107 643 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm14655-201ENSMUST00000120124 578 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm13867-201ENSMUST00000120844 395 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm11344-201ENSMUST00000122011 335 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm3362-201ENSMUST00000148102 466 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm16060-201ENSMUST00000153140 478 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm26828-201ENSMUST00000180640 172 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm43350-201ENSMUST00000196382 711 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm17935-201ENSMUST00000196649 772 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm43794-201ENSMUST00000200971 692 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm8556-201ENSMUST00000210437 664 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm8158-201ENSMUST00000219220 465 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm8112-201ENSMUST00000219637 465 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Mir338-201ENSMUST00000083666 98 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Vps28Q9D1C8 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps28Q9D1C8 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms