Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm11517-201ENSMUST00000119491 387 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm7079-201ENSMUST00000119726 171 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm14159-201ENSMUST00000119832 451 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm13482-201ENSMUST00000119842 254 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm7746-201ENSMUST00000120966 503 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm11321-201ENSMUST00000121257 902 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25970-201ENSMUST00000157165 86 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26353-201ENSMUST00000158224 255 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25397-201ENSMUST00000176951 92 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22258-201ENSMUST00000177645 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26502-201ENSMUST00000177732 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l13-201ENSMUST00000177737 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25350-201ENSMUST00000177849 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l15-201ENSMUST00000177940 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23446-201ENSMUST00000177977 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l4-201ENSMUST00000177982 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26201-201ENSMUST00000178047 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm24711-201ENSMUST00000178062 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm24609-201ENSMUST00000178166 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23265-201ENSMUST00000178321 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22812-201ENSMUST00000178329 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l3-201ENSMUST00000178370 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26246-201ENSMUST00000178388 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22131-201ENSMUST00000178415 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25155-201ENSMUST00000178450 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm24760-201ENSMUST00000178530 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26032-201ENSMUST00000178535 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22285-201ENSMUST00000178576 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22417-201ENSMUST00000178656 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l2-201ENSMUST00000178675 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26270-201ENSMUST00000178690 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l16-201ENSMUST00000178777 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25074-201ENSMUST00000178782 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25210-201ENSMUST00000178813 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25157-201ENSMUST00000178914 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23313-201ENSMUST00000178931 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23089-201ENSMUST00000178947 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22046-201ENSMUST00000179027 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm24153-201ENSMUST00000179280 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25597-201ENSMUST00000179388 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22941-201ENSMUST00000179630 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22631-201ENSMUST00000179656 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25816-201ENSMUST00000179764 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26188-201ENSMUST00000179963 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm25471-201ENSMUST00000180126 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm26433-201ENSMUST00000180227 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23862-201ENSMUST00000180342 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm22128-201ENSMUST00000180346 94 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm28404-201ENSMUST00000190242 453 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm38237-201ENSMUST00000193366 376 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm18487-201ENSMUST00000215826 878 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 n-R5s156-201ENSMUST00000083377 105 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm23502-201ENSMUST00000083902 145 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ssu72Q9CY97 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ssu72Q9CY97 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms