Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm22885-201ENSMUST00000157410 107 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Zakit-201ENSMUST00000157677 308 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm18871-201ENSMUST00000218655 745 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm6988-201ENSMUST00000222676 375 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm23875-201ENSMUST00000083711 318 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm6177-201ENSMUST00000085589 465 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Smc1aQ9CU62 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Snord66-201ENSMUST00000104051 75 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm23594-201ENSMUST00000104307 134 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm13250-201ENSMUST00000117209 753 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm14878-201ENSMUST00000118167 293 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm13132-201ENSMUST00000121194 472 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm26371-201ENSMUST00000157829 104 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm37088-201ENSMUST00000193887 406 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm29815-201ENSMUST00000202418 178 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Snora52-201ENSMUST00000082732 137 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm23677-201ENSMUST00000083156 104 ntBASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Smc1aQ9CU62 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm24124-201ENSMUST00000104103 132 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm25726-201ENSMUST00000104529 129 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm13733-201ENSMUST00000117290 535 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm14628-201ENSMUST00000117508 635 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm14854-201ENSMUST00000117758 841 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm14991-201ENSMUST00000119913 598 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm12190-201ENSMUST00000120001 187 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm22514-201ENSMUST00000122547 308 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm24636-201ENSMUST00000158673 288 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm5258-201ENSMUST00000165437 327 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm6155-201ENSMUST00000173735 341 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm19280-201ENSMUST00000190191 205 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm44779-201ENSMUST00000206937 708 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Gm18306-201ENSMUST00000207338 569 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Smc1aQ9CU62 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms