Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm15530-201ENSMUST00000122206 555 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm22158-201ENSMUST00000158411 126 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Mir713-201ENSMUST00000178651 108 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm30280-201ENSMUST00000192214 262 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm43015-201ENSMUST00000199087 565 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm44038-201ENSMUST00000203952 889 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm4045-201ENSMUST00000204076 310 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm18320-201ENSMUST00000211304 595 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cstf1Q99LC2 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm5757-201ENSMUST00000117494 528 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm4910-201ENSMUST00000119605 366 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm14564-201ENSMUST00000122159 294 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm22792-201ENSMUST00000157225 133 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm24690-201ENSMUST00000157759 97 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm23318-201ENSMUST00000158000 108 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm24944-201ENSMUST00000158330 128 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm18547-201ENSMUST00000192439 811 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm34272-201ENSMUST00000208886 253 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm45458-201ENSMUST00000209900 522 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.54□□□□□ -1.68
Cstf1Q99LC2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Mir676-201ENSMUST00000102443 89 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm23746-201ENSMUST00000104229 125 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm12820-201ENSMUST00000119233 342 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm14655-201ENSMUST00000120124 578 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm24371-201ENSMUST00000122662 267 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm23467-201ENSMUST00000157127 159 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm26490-201ENSMUST00000157879 140 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm25432-201ENSMUST00000158284 66 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm22243-201ENSMUST00000178754 120 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 Gm18828-202ENSMUST00000181035 310 ntBASIC4.53□□□□□ -1.68
Cstf1Q99LC2 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms