Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Brf1Q8CFK2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm14445-201ENSMUST00000117051 1484 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm12285-201ENSMUST00000117347 233 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm8145-201ENSMUST00000118220 745 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm14007-201ENSMUST00000118288 210 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm11346-201ENSMUST00000118346 704 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm14082-201ENSMUST00000118582 801 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm14600-201ENSMUST00000121032 630 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm11891-201ENSMUST00000121241 619 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm11759-201ENSMUST00000121742 464 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm15838-201ENSMUST00000161575 180 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm27522-201ENSMUST00000183949 230 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm44330-201ENSMUST00000200106 143 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 AC192616.3-201ENSMUST00000220797 1124 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Brf1Q8CFK2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.86□□□□□ -1.47
Brf1Q8CFK2 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Mir582-201ENSMUST00000103758 81 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm15001-201ENSMUST00000117657 795 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm25048-201ENSMUST00000158598 91 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm22857-201ENSMUST00000174969 134 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm27659-201ENSMUST00000183472 98 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm4322-201ENSMUST00000191094 336 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm43550-201ENSMUST00000200597 303 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm5885-202ENSMUST00000203357 528 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm6261-201ENSMUST00000204707 760 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm45240-201ENSMUST00000211437 674 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm24319-201ENSMUST00000083389 107 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Gm7676-201ENSMUST00000084055 319 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Brf1Q8CFK2 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.85□□□□□ -1.47
Brf1Q8CFK2 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms