Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm12520-201ENSMUST00000117493 316 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm12103-201ENSMUST00000121892 362 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm14916-201ENSMUST00000121904 204 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm11281-201ENSMUST00000141391 576 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm25037-201ENSMUST00000175418 110 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Mir5110-201ENSMUST00000175537 87 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc28aQ8CEI3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Lipe-203ENSMUST00000105177 1251 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm23879-201ENSMUST00000116874 126 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm15426-201ENSMUST00000117823 556 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm15168-201ENSMUST00000121057 316 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm22378-201ENSMUST00000157481 111 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm22314-201ENSMUST00000158007 281 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm24224-201ENSMUST00000158828 258 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm3077-201ENSMUST00000165903 627 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm27849-201ENSMUST00000183673 125 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm27883-201ENSMUST00000183941 102 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Mir6938-201ENSMUST00000184173 63 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Mir7653-201ENSMUST00000184358 61 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm37072-201ENSMUST00000194570 837 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm35702-201ENSMUST00000198653 511 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm45651-201ENSMUST00000210857 335 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.34□□□□□ -1.71
Ccdc28aQ8CEI3 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc28aQ8CEI3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm12379-201ENSMUST00000119607 391 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm5379-201ENSMUST00000120973 826 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm22084-201ENSMUST00000157585 105 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm9320-201ENSMUST00000184151 473 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm4412-201ENSMUST00000186660 433 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm29086-201ENSMUST00000186774 222 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm29085-201ENSMUST00000187108 225 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm42539-201ENSMUST00000197009 308 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm43724-201ENSMUST00000197516 226 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc28aQ8CEI3 Gm7045-201ENSMUST00000221466 605 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms