Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Lipe-203ENSMUST00000105177 1251 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm14649-201ENSMUST00000121814 324 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm15141-201ENSMUST00000121860 729 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm5263-201ENSMUST00000163646 601 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm6245-201ENSMUST00000164699 768 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm20657-201ENSMUST00000177079 515 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm29320-201ENSMUST00000185235 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm29179-202ENSMUST00000186138 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm29448-201ENSMUST00000186675 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm29314-201ENSMUST00000186800 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm28253-202ENSMUST00000187971 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm29169-201ENSMUST00000189835 615 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm37636-201ENSMUST00000193583 359 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm43828-201ENSMUST00000196890 639 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm32308-201ENSMUST00000203053 280 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm19885-201ENSMUST00000212853 343 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm6462-201ENSMUST00000081488 304 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm25140-201ENSMUST00000083254 140 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc40Q8BI79 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm24124-201ENSMUST00000104103 132 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm14163-201ENSMUST00000117342 217 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm15297-201ENSMUST00000117795 290 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm11984-201ENSMUST00000118142 766 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm12988-201ENSMUST00000119054 478 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm15171-201ENSMUST00000122191 334 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm15795-201ENSMUST00000160969 553 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm8214-201ENSMUST00000172123 351 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm43308-201ENSMUST00000197236 373 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm43919-201ENSMUST00000204303 364 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm44773-201ENSMUST00000207374 557 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm23626-201ENSMUST00000082458 133 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.79□□□□□ -1.64
Ccdc40Q8BI79 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms