Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm11486-201ENSMUST00000107322 478 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm14365-201ENSMUST00000117535 587 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm11200-201ENSMUST00000121698 448 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm23837-201ENSMUST00000122656 286 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm9785-202ENSMUST00000144563 593 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm25150-201ENSMUST00000157121 60 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm22794-201ENSMUST00000157228 306 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm26310-201ENSMUST00000157766 117 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm26354-201ENSMUST00000158221 129 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm6650-201ENSMUST00000166710 614 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm23145-201ENSMUST00000178912 79 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm25942-201ENSMUST00000180080 110 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm6717-201ENSMUST00000185549 838 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm5058-201ENSMUST00000187331 463 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm2497-201ENSMUST00000189539 601 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm17775-201ENSMUST00000198542 258 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm18327-201ENSMUST00000202426 830 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 AC124569.1-201ENSMUST00000225932 101 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm25595-201ENSMUST00000102273 97 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm24160-201ENSMUST00000104594 126 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm13640-201ENSMUST00000118445 264 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm14560-201ENSMUST00000118672 375 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm11252-201ENSMUST00000120572 939 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm26349-201ENSMUST00000157530 130 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm23513-201ENSMUST00000158181 133 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm23855-201ENSMUST00000158377 135 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm20648-201ENSMUST00000175815 328 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm9775-201ENSMUST00000189402 331 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm29475-201ENSMUST00000190767 312 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 Gm8672-201ENSMUST00000221200 332 ntBASIC4.97□□□□□ -1.61
Ubfd1Q78JW9 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms